Clinical Proteomics

Bile Processing Protocol for Improved Proteomic Analysis.- MS-Based Extracellular Vesicles (EVs) Analysis: An Application to Helminth-Secreted EVs.- Proteomic Profiling of Cerebrospinal Fluid by 16-Plex TMT-Based Mass Spectrometry.- Data-Independent Acquisition Mass Spectrometry-Based Deep Proteome Analysis for Hydrophobic Proteins from Dried Blood Spots Enriched by Sodium Carbonate Precipitation.- Sample Processing for Metaproteomic Analysis of Human Gut Microbiota.- Mass Spectrometry-Based Analytical Strategy for Single Cell Proteomics.- Lysine Acetylation Stoichiometry Analysis at the Proteome Level.- Implementation of Clinical Phosphoproteomics and Proteomics for Personalized Medicine.- pH/Acetonitrile-Gradient-Reversed-Phase Fractionation of Enriched Hyper-Citrullinated Library in Combination with LC-MS/MS Analysis for Confident Identification of Citrullinated Peptides.- Purification of HLA Immunopeptidomes from Human Thymus.- Generation of HLA Allele-Specific Spectral Libraries to Identify and Quantify Immunopeptidomes by SWATH/DIA-MS.- Immunopeptidomic Analysis of the Phosphopeptidome Displayed by Hla Class I Molecules.- Development of a Standardized MRM Method for Quantification of One Carbon Metabolism Enzymes.- Molecular Histology Analysis of Cryopreserved Tissue Using Peptide/Protein MALDI-TOF Imaging Mass Spectrometry (MALDI-IMS).- The Human Protein Atlas and Antibody-Based Tissue Profiling in Clinical Proteomics.- Microbial Identification in the Clinical Microbiology Laboratory Using MALDI-TOF-MS.- Combining Electron Microscopy (EM) and Cross-Linking Mass Spectrometry (XL-MS) for Structural Characterization of Protein Complexes.- Accurate Prediction of Protein Sequences for Proteogenomics Data Integration.